PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_01771.1_g00003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 371aa    MW: 40351.5 Da    PI: 4.5892
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_01771.1_g00003.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.12.6e-15211266358
                              XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                              ++kr+rr+ +NRe+ArrsR+RK++ +  L+  v +L  e ++L k+l  ++++v++
  Rsa1.0_01771.1_g00003.1 211 DVKRARRMLSNRESARRSRRRKQEHMSDLASQVGQLRDEHSTLLKRLGAMNQKVST 266
                              68*********************************************999998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.4E-12207265No hitNo description
SMARTSM003382.7E-18209273IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841211265IPR004827Basic-leucine zipper domain
PfamPF001704.4E-13212265IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-11213263No hitNo description
PROSITE patternPS000360216231IPR004827Basic-leucine zipper domain
PfamPF124986.3E-11280339IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MKSGFSADDS TDSFCPPPQP SPPPSPPQAQ GEGLTRSQSE WAFQMLLEEI SGSSISSTDN  60
ATGRSSPHVQ SESSVSKPEE PSSDDVVEIQ KPPHNGSRNR TPSSSSVDEM DPKFLQSKLE  120
LACAAAVALR MVGTVTPEYS SALKQVSPVG SQTQGPQMSP AVSSVSDAPS LDTQKQQDIQ  180
SRLATSVSDD SDDDDPDGET VTTVNADDPT DVKRARRMLS NRESARRSRR RKQEHMSDLA  240
SQVGQLRDEH STLLKRLGAM NQKVSTAVVD NRVLKAELET MRTKVKMAED TVKRMTGINP  300
MVLATPYSVR FDRTLMDSSQ PNLNQPDMIP NQGSDNESFA SNTVVTLETS CIAFETLPHW  360
DLEAGENKPQ E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225232RRSRRRKQ
2227232SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013706923.11e-139PREDICTED: basic leucine zipper 25-like
SwissprotQ9M1G62e-67BZP25_ARATH; Basic leucine zipper 25
TrEMBLA0A078FPZ61e-139A0A078FPZ6_BRANA; BnaC03g21720D protein
STRINGBra000102.1-P1e-131(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2025756
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.17e-51basic leucine zipper 25